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Image Search Results
Journal: bioRxiv
Article Title: A Chemical-Enhanced System for CRISPR-Based Nucleic Acid Detection
doi: 10.1101/2021.03.28.437376
Figure Lengend Snippet: a Fluorescence signal kinetics of AsCas12-mediated detection for SARS-CoV-2 S gene synthetic DNA (10 10 copies) with indicated chemical additives in the reaction mix. w/o template means no input in CRISPR detection system; differential amount of chemicals are added in the reaction mix: no chemical (-), with indicated amount of chemical (+). a.u., arbitrary unit. b Effects of L-proline on AsCas12-mediated SARS-CoV-2 N gene DNA template detection using different types of Cas protein representing differential states of denaturing in batch #1 CutSmart reaction buffer. L-proline is added in the CRISPR detection mix. Three types of AsCas12a protein are used in this assay - type 1: fresh protein from frozen stock; type 2: protein left at room temperature for 48 hours; and type 3: protein undergone multiple freeze-thaw cycles during 48 hours. Endpoint (60 min) recording of fluorescence detection signals are shown. w/o template means no input in CRISPR detection system; differential amount of L-proline are added in the reaction mix: no L-proline (-), with indicated amount of L-proline (+). a.u., arbitrary unit. c Batch effect of reaction buffers on AsCas12a-based detection and L-proline’s enhancement. The same samples used in b are gone through the similar assays only except that the reaction buffer changes to batch #2. a.u., arbitrary unit. d Effects of L-proline on AsCas12a-based detection for SARS-CoV-2 S gene DNA template with heat-denatured AsCas12a proteins. AsCas12a protein is pre-heated for 2, 4 and 6 hours in 42°C, and then is examined for their capability on CRISPR detection in the absence (-) or presence (+) of 0.5 M L-proline in the detection mix. Fluorescence signal kinetics is shown. a.u., arbitrary unit. e Effects of BSA and L-proline addition on AsCas12-mediated SARS-CoV-2 N gene DNA template detection using Takara-T and Takara-K buffers. Endpoint (60 min) recording of fluorescence detection signals is shown. w/o template means no input in CRISPR detection system; differential amount of chemicals are added in the reaction mix: no chemical (-), with indicated amount of chemical (+). a.u., arbitrary unit. f Comparison of different sources of BSA on AsCas12-mediated SARS-CoV-2 N gene DNA template detection in Takara-K buffer. Different vendors of BSA are used. Endpoint (60 min) recording of fluorescence detection signals are shown. a.u., arbitrary unit. g, h Evaluation of multiple batches (#3 - #7) of CutSmart buffer for the effect on AsCas12a (g) and LwaCas13a (h) detection capability without (-) or with (+) 0.5 M L-proline addition using SARS-CoV-2 N gene DNA (g) or RNA (h) templates. Endpoint (60 min) recording of fluorescence detection signals are shown. a.u., arbitrary unit.
Article Snippet: These batch deviated results suggest that certain ingredients within
Techniques: Fluorescence, CRISPR, Comparison